Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.080 Biomarker disease BEFREE We used four different H. pylori strains isolated from patients with gastritis or duodenal ulcer disease to examine their differential effects on signaling pathways and IL-8 gene response in gastric epithelial cells. 20886283 2011
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.100 Biomarker disease BEFREE We studied 144 patients with non-cardia gastric cancer (NCGC)(41/50 with present or past H. pylori infection), 75 with duodenal ulcer (DU)(66 H. pylori infected) and 171 with gastritis (CG)(107 H. pylori infected). cagA gene was present in 24/28 NCGC, 45/59 DU and 56/107 CG. 18179773 2008
Entrez Id: 4588
Gene Symbol: MUC6
MUC6
0.020 Biomarker disease BEFREE We observed that the molar content of MUC6 mucin doubled (without significance) in mucus from patients with duodenal ulcer, and increased five times (with high significance) in mucus from patients with gastric ulcer, when compared with that in mucus from individuals without gastroduodenal disease. 23643621 2013
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.300 Biomarker disease CTD_human We investigated the effects of COX and NOS inhibitors on the healing of duodenal ulcers, in comparison with gastric ulcers, in rats. 12481160 2002
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.100 Biomarker disease BEFREE We examined the diversity of vacA and cagA genes in 143 isolates obtained from patients with duodenal ulcer or chronic gastritis in East Asia (two different areas of Japan, Fukui and Okinawa, and also in Hangzhou, China) by polymerase chain reaction (PCR) and sequence analysis. 14734191 2004
Entrez Id: 4282
Gene Symbol: MIF
MIF
0.020 GeneticVariation disease BEFREE We attempted to clarify the association of functional polymorphisms of MIF gene promoter with the development of gastro-duodenal ulcer. 20878093 2010
Entrez Id: 4316
Gene Symbol: MMP7
MMP7
0.010 GeneticVariation disease BEFREE We assessed the MMP-7-181 and CMA/B polymorphisms in H. pylori-positive patients with gastric cancer (n = 160), gastric ulcer (n = 157), duodenal ulcer (n = 121), and H. pylori-positive gastritis alone as controls (n = 156). 18958543 2008
Entrez Id: 23158
Gene Symbol: TBC1D9
TBC1D9
0.010 GeneticVariation disease BEFREE We assessed the MDR1 C3435T polymorphism in H. pylori-positive gastritis alone patients (n=150), gastric cancer (n=292), gastric ulcer (n=215), and duodenal ulcer (n=163) and H. pylori-negative subjects (n=168) as control by a PCR-based method. 18644389 2008
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.010 GeneticVariation disease BEFREE We assessed the MDR1 C3435T polymorphism in H. pylori-positive gastritis alone patients (n=150), gastric cancer (n=292), gastric ulcer (n=215), and duodenal ulcer (n=163) and H. pylori-negative subjects (n=168) as control by a PCR-based method. 18644389 2008
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.210 Biomarker disease RGD Using a rat model, we have demonstrated that Candida infection can delay the wound healing process of duodenal ulcers by means of a low expression of VEGF-A and PCNA. 18622701 2008
Entrez Id: 2519
Gene Symbol: FUCA2
FUCA2
0.010 Biomarker disease BEFREE Upon depletion of FUCA2 by RNA interference and detection of translocated CagA (a virulence factor of H. pylori) in host cells, FUCA2 was found to be essential for H. pylori adhesion, in particular to the gastric cancer- and duodenal ulcer-specific strains. 19666478 2009
Entrez Id: 551
Gene Symbol: AVP
AVP
0.010 GeneticVariation disease BEFREE To further investigate the possible role of acetaldehyde in the pathogenesis of alcoholic liver disease, we determined the ADH and ALDH genotype frequencies in patients with alcohol-related cirrhosis (n = 27), viral hepatitis-related cirrhosis (n = 29) and gastric and duodenal ulcer without relevance to alcohol (n = 30). 7904979 1994
Entrez Id: 3105
Gene Symbol: HLA-A
HLA-A
0.010 GeneticVariation disease BEFREE To assess the influence of ethnic origin on the incidence of HLA antigens in duodenal ulcer, we typed 160 white Australian patients (including 22 born in Greece or Italy) and 320 blood donor controls for the HLA-A and -B loci. 7166208 1982
Entrez Id: 1958
Gene Symbol: EGR1
EGR1
0.010 Biomarker disease BEFREE Thus, our research during the last three decades focused on the molecular mechanisms of duodenal ulcer in rodent models of chemically induced duodenal ulceration, and here we review our three recent findings: Endothelins (ET-1), the immediate early gene egr-1 and imbalance of angiogenic/antiangiogenic molecules. 17656571 2007
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.200 Biomarker disease RGD Thus, STAT3 represents an important new molecular mechanism in experimental duodenal ulceration. 24385009 2014
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.100 GeneticVariation disease BEFREE Three hundred and ninety-nine patients with gastroduodenal diseases (129 chronic gastritis, 127 duodenal ulcer and 143 non-cardiac gastric cancer) and 264 healthy controls were genotyped for IL-1B-511 and IL-1RN gene polymorphisms by the PCR-RFLP method. 17295877 2007
Entrez Id: 4353
Gene Symbol: MPO
MPO
0.010 GeneticVariation disease BEFREE This work verifies for the first time the association of myeloperoxidase (-468)G-->A polymorphism with antral H pylori density and DU disease. 15884126 2005
Entrez Id: 168400
Gene Symbol: DDX53
DDX53
0.030 GeneticVariation disease BEFREE This study was undertaken to determine whether infection with Helicobacter pylori strains that contain the cagE gene was associated with duodenal ulceration in children. 10762568 2000
Entrez Id: 5265
Gene Symbol: SERPINA1
SERPINA1
0.030 Biomarker disease BEFREE This study does not support an association between hereditary alpha 1-AT deficiency and duodenal ulcer disease, and makes therefore a possible role of such a deficiency in the etiology of peptic ulcer disease highly unlikely. 3260879 1988
Entrez Id: 28982
Gene Symbol: FLVCR1
FLVCR1
0.010 Biomarker disease BEFREE This study aimed to investigate the intestinal microbiota in duodenal ulcer (DU) patients, effects of proton pump inhibitors,clarithromycin and amoxicillin, PCA) for Helicobacter pylori (H. pylori) and Bacillus subtilis and Enterococcus faecium (BSEF) on intestinal microbiota. 31492912 2019
Entrez Id: 54106
Gene Symbol: TLR9
TLR9
0.010 GeneticVariation disease BEFREE This is the first study to show an association of 2848A allele of TLR9 with duodenal ulcer and with altered expression of inflammatory cytokines in the gastric mucosa. 25995217 2015
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.100 GeneticVariation disease BEFREE This does not support the view that subtypes of the 3' region of cagA gene in H. pylori isolated from Iran correlate with the clinical outcomes of H. pylori, but colonization with cagA positive strains was significantly higher among duodenal ulcer than gastritis patients in Iran. 18612816 2009
Entrez Id: 4049
Gene Symbol: LTA
LTA
0.040 GeneticVariation disease BEFREE These results suggest that TNF and LTA gene polymorphisms are related to the development of gastric and duodenal ulcer and may determine disease outcome in H. pylori infection. 11781708 2001
Entrez Id: 5225
Gene Symbol: PGC
PGC
0.010 GeneticVariation disease BEFREE These results suggest that there is genetic heterogeneity in combined gastric and duodenal ulcers depending upon the location of gastric ulcer, and that combined gastric body and duodenal ulcers are associated with the small fragment allele of the PGC RFLP in the same way as solitary gastric body ulcers. 7948814 1994
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.090 GeneticVariation disease BEFREE These results suggest that TNF and LTA gene polymorphisms are related to the development of gastric and duodenal ulcer and may determine disease outcome in H. pylori infection. 11781708 2001